Variant calling tool for long-read sequencing data
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
Toolkit for processing sequences in FASTA/Q formats
µnit is a small testing framework for C
A massively spiffy yet delicately unobtrusive compression library.
SDK for GPU accelerated genome assembly and analysis
SIMD partial order alignment tool/library
CUB is a flexible library of cooperative threadblock primitives and other utilities for CUDA kernel programming.
A cross platform C99 library to get cpu features at runtime.
Fast C++ logging library.
Implementations of SIMD instruction sets for systems which don't natively support them.
A microbenchmark support library
C++ support library for bioinformatics tools
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
C++ library for parsing several formats in bioinformatics
Googletest - Google Testing and Mocking Framework
Sequence correction provided by ONT Research
