# bcftools

**Repository Path**: tianfuzeng/bcftools

## Basic Information

- **Project Name**: bcftools
- **Description**: This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
- **Primary Language**: Unknown
- **License**: GPL-3.0
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2020-08-18
- **Last Updated**: 2024-05-29

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

[![Build Status](https://travis-ci.org/samtools/bcftools.svg?branch=develop)](https://travis-ci.org/samtools/bcftools)

This is the official development repository for BCFtools. It contains all the vcf* commands
which previously lived in the htslib repository (such as vcfcheck, vcfmerge, vcfisec, etc.)
and the samtools BCF calling from bcftools subdirectory of samtools. 

For a full documentation, see [bcftools GitHub page](http://samtools.github.io/bcftools/). 

Other useful links:
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File format specifications live on [HTS-spec GitHub page](http://samtools.github.io/hts-specs/)
[htslib](https://github.com/samtools/htslib)
[samtools](https://github.com/samtools/samtools)
[tabix](https://github.com/samtools/tabix)