# Deng-2020

**Repository Path**: quanrd_admin/Deng-2020

## Basic Information

- **Project Name**: Deng-2020
- **Description**: No description available
- **Primary Language**: Unknown
- **License**: Not specified
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2025-04-09
- **Last Updated**: 2025-04-09

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

# Deng-2020
## Genome wide association study reveals plant loci controlling heritability of the rhizosphere microbiome

*Siwen Deng, Daniel F. Caddell, Gen Xu, Lindsay Dahlen, Lorenzo Washington, Jinliang Yang, Devin Coleman-Derr*

Link to final publication: https://doi.org/10.1038/s41396-021-00993-z

Link to BioRxiv preprint: https://doi.org/10.1101/2020.02.21.960377

Included in this repository are...
+ Deng2020.Rmd (R markdown file to run analyses and generate figures)
+ all associated txt files needed to run Deng2020.Rmd analyses and generate figures
+ all associated R data files needed to run Deng2020.Rmd analyses and generate figures
+ Data_processing.Rmd (R markdown to perform data processing, normalization, heritability analysis, and GWAS analysis)
+ all associated files needed to run Data_processing.Rmd

Raw sequence files have been uploaded to NCBI under BioProject PRJNA612320 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA612320)